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ammawla/encode-toolkit

MCP Developer Tools

MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments.

Python Latest v0.3.0 · 4mo ago Security brief →

Features

  • Search ENCODE data and cross‑reference with 14 external databases
  • Run 7 built‑in genomics analysis pipelines (e.g., ChIP‑seq, ATAC‑seq)
  • Generate publication‑ready methods sections with full provenance tracking

Recent releases

View all 3 releases →
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v0.3.0-beta.10 Breaking risk

License change

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v0.3.0-beta.9 New feature

Cursor plugin + commands + agents

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About

Stars
37
Forks
5
Languages
Python Nextflow Dockerfile
Downloads/week
26 ↑21%
NPM Maintainers
1 Single npm maintainer
Contributors
2

Install & Platforms

Install via
pip npm

Beta — feedback welcome: [email protected]