wso2/fhir-mcp-server

MCP Data & Storage

A Model Context Protocol (MCP) server that bridges AI/LLM tools with FHIR healthcare APIs, enabling seamless search, retrieval, and analysis of clinical data.

Track releases GitHub

Python Latest 0.10.0 · 7mo ago Security brief →

Features

Provides MCP‑compatible transport for FHIR via stdio, SSE, or streamable HTTP
Supports SMART‑on‑FHIR authentication for secure access to FHIR servers
Allows response filtering using custom FHIRPath expressions to reduce payload size
Integrates with MCP clients such as VS Code, Claude Desktop, and MCP Inspector

Recent releases

View all 2 releases →

0.10.0 Breaking risk 7mo

Breaking changes

Remove disable-auth flag

Notable features

Enable agents to retrieve authenticated user's FHIR profile information
GitHub MCP registry support
Automated MCP registry publishing

Full changelog

What's Changed

Feat: Enable agents to retrieve authenticated user's FHIR profile information by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/15
Update README.md by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/16
Refactor: Temporarily removed Docker installation section in README by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/18
Fix: Use fetch_raw to retrieve full bundles instead of entries by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/20
Add GitHub MCP registry support by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/21
Add testing workflow by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/24
Feat: Add automated MCP registry publishing by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/27
Feat: Add CODEOWNERS file for automated code review assignments by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/26
Update Dockerfile and add docker compose. by @danielhmendoza01 in https://github.com/wso2/fhir-mcp-server/pull/25
Remove disable-auth flag by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/28

New Contributors

@danielhmendoza01 made their first contribution in https://github.com/wso2/fhir-mcp-server/pull/25

Full Changelog: https://github.com/wso2/fhir-mcp-server/compare/0.9.0...0.10.0

View release on GitHub

0.9.0 New feature 10mo

Notable features

Dynamic authentication toggling CLI options
Docker support
Automated PyPI and GitHub release workflow

Full changelog

What's Changed

Initial implementation and project setup for FHIR MCP server by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/1
Refactor: Add dynamic authentication toggling CLI options by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/2
Feature: Add docker support by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/3
Test cases for the fhir mcp server by @nirmal070125 in https://github.com/wso2/fhir-mcp-server/pull/7
Tests: Add e2e tests for MCP tools by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/6
Update the readme by @nirmal070125 in https://github.com/wso2/fhir-mcp-server/pull/8
Simplify Auth Flow in MCP with FHIR server by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/9
Readme update by @joelsathi in https://github.com/wso2/fhir-mcp-server/pull/10
Update the readme by @nirmal070125 in https://github.com/wso2/fhir-mcp-server/pull/12
feat: Add automated PyPI and GitHub release workflow by @VimukthiRajapaksha in https://github.com/wso2/fhir-mcp-server/pull/13

New Contributors

@VimukthiRajapaksha made their first contribution in https://github.com/wso2/fhir-mcp-server/pull/1
@nirmal070125 made their first contribution in https://github.com/wso2/fhir-mcp-server/pull/7
@joelsathi made their first contribution in https://github.com/wso2/fhir-mcp-server/pull/9

Full Changelog: https://github.com/wso2/fhir-mcp-server/commits/0.9.0

View release on GitHub

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